BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028H06LP1|AL428978
(851 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1626 1676 0.0
>3x_Contig1626
Length = 17698
Score = 1676 bits (845), Expect = 0.0
Identities = 849/851 (99%)
Strand = Plus / Plus
Query: 1 gatcggaataaatgacccgatcaccgtcaatggtcaagttgtatccatggttttgagcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gatcggaataaatgacccgatcaccgtcaatggtcaagttgtatccatggttttgagcaa 182
Query: 61 ttttattggtaatgccagcwgttctttccaacacctcttttgcgtttgagtgcatgccaa 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttttattggtaatgccagcagttctttccaacacctcttttgcgtttgagtgcatgccaa 242
Query: 121 tacggtagttgatctccagagaaccagtttctggtagtgcatttaccttgacacctgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tacggtagttgatctccagagaaccagtttctggtagtgcatttaccttgacacctgaat 302
Query: 181 ggaacatgtcaatagactcggtggttttgaacgttaaagctgataaaggatcaaatactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggaacatgtcaatagactcggtggttttgaacgttaaagctgataaaggatcaaatactt 362
Query: 241 ccaatgcttttacaaattccagtctgtatttgtatgaagtggctgctttcttaattatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 ccaatgcttttacaaattccagtctgtatttgtatgaagtggctgctttcttaattatgt 422
Query: 301 gacggaagccaggatctatcttattagaaaactcagcaacacattggtaataggataaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gacggaagccaggatctatcttattagaaaactcagcaacacattggtaataggataaaa 482
Query: 361 acggatgcgtgtcttcaatcacgtaatcaaatgagttattttccagcgtgtatactagtt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 acggatgcgtgtcttcaatcacgtaatcaaatgagttattttccagcgtgtatactagtt 542
Query: 421 cacttaaaataccaacattcgtatgctttggtggtacagaggaatgtccgcctggacctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cacttaaaataccaacattcgtatgctttggtggtacagaggaatgtccgcctggacctg 602
Query: 481 aaattgtgatttcaatgttaccaaatcctctttcctgagttattggaacagctgcatata 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 603 aaattgtgatttcaatgttaccaaatcctctttcctgagtaattggaacagctgcatata 662
Query: 541 gtcctgactccacttcaacaacaccggccccttcatccataatggtgaatatgctatcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gtcctgactccacttcaacaacaccggccccttcatccataatggtgaatatgctatcag 722
Query: 601 taccatatctttcttccacgaactgagacaaagtacgagcaccaatctcaccaccacttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 taccatatctttcttccacgaactgagacaaagtacgagcaccaatctcaccaccacttt 782
Query: 661 cttcatcaaaaccgaacagcaagatgattgttcgctgaggttggaagccgtctctcaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 cttcatcaaaaccgaacagcaagatgattgttcgctgaggttggaagccgtctctcaaca 842
Query: 721 actcttccattgccactaattcaccaatcaaggtagtcttacaatctgctgaaccacggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 actcttccattgccactaattcaccaatcaaggtagtcttacaatctgctgaaccacggc 902
Query: 781 cccaaacactttctccatcgtagtagcctgaaaatggaggatgtttccaatcgccaacag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 cccaaacactttctccatcgtagtagcctgaaaatggaggatgtttccaatcgccaacag 962
Query: 841 tttctggatta 851
|||||||||||
Sbjct: 963 tttctggatta 973
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5900
Number of Sequences: 1807
Number of extensions: 5900
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 851
length of database: 10,358,551
effective HSP length: 16
effective length of query: 835
effective length of database: 10,329,639
effective search space: 8625248565
effective search space used: 8625248565
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)